NWChem

NWChem is an open-source high performance computational chemistry package. Per NWChem's documentation, "NWChem aims to provide its users with computational chemistry tools that are scalable both in their ability to treat large scientific computational chemistry problems efficiently, and in their use of available parallel computing resources from high-performance parallel supercomputers to conventional workstation clusters."

To run this test with the Phoronix Test Suite, the basic command is: phoronix-test-suite benchmark nwchem.

Project Site

nwchemgit.github.io

Test Created

15 April 2020

Last Updated

1 March 2021

Test Maintainer

Michael Larabel 

Test Type

Processor

Average Install Time

19 Minutes, 15 Seconds

Average Run Time

3 Hours, 27 Minutes, 55 Seconds

Test Dependencies

C/C++ Compiler Toolchain + OpenMPI + Fortran + BLAS (Basic Linear Algebra Sub-Routine) + LAPACK (Linear Algebra Pack) + Linear Algebra Pack + Tool Command Language

Accolades

10k+ Downloads

Supported Platforms


Public Result Uploads *Reported Installs **Reported Test Completions **Test Profile Page Views ***OpenBenchmarking.orgEventsNWChem Popularity Statisticspts/nwchem2020.042020.062020.082020.102020.122021.022021.042021.062021.082021.102021.122022.022022.042022.062022.082022.102022.122023.022023.042023.062023.082023.102023.122024.022024.042024.062024.0816003200480064008000
* Uploading of benchmark result data to OpenBenchmarking.org is always optional (opt-in) via the Phoronix Test Suite for users wishing to share their results publicly.
** Data based on those opting to upload their test results to OpenBenchmarking.org and users enabling the opt-in anonymous statistics reporting while running benchmarks from an Internet-connected platform.
*** Test profile page view reporting began March 2021.
Data updated weekly as of 19 September 2024.

Revision History

pts/nwchem-1.1.1   [View Source]   Mon, 01 Mar 2021 16:14:13 GMT
Update project URL per https://github.com/phoronix-test-suite/phoronix-test-suite/pull/507

pts/nwchem-1.1.0   [View Source]   Wed, 03 Feb 2021 09:51:01 GMT
Update against NWChem 7.0.2 upstream.

pts/nwchem-1.0.0   [View Source]   Wed, 15 Apr 2020 12:40:14 GMT
Initial commit of NWChem 7.0.0.

Suites Using This Test

HPC - High Performance Computing

Molecular Dynamics

Scientific Computing


Performance Metrics

Analyze Test Configuration:

NWChem 7.0.2

Input: C240 Buckyball

OpenBenchmarking.org metrics for this test profile configuration based on 1,079 public results since 3 February 2021 with the latest data as of 10 September 2024.

Below is an overview of the generalized performance for components where there is sufficient statistically significant data based upon user-uploaded results. It is important to keep in mind particularly in the Linux/open-source space there can be vastly different OS configurations, with this overview intended to offer just general guidance as to the performance expectations.

Component
Percentile Rank
# Compatible Public Results
Seconds (Average)
99th
17
1250 +/- 138
97th
10
1387 +/- 22
95th
13
1450 +/- 6
93rd
12
1474 +/- 185
93rd
37
1494 +/- 91
93rd
17
1518 +/- 79
91st
10
1565 +/- 99
90th
16
1569 +/- 219
86th
9
1682 +/- 37
82nd
41
1778 +/- 100
76th
13
1852 +/- 20
Mid-Tier
75th
> 1867
73rd
8
1893 +/- 128
72nd
5
1901 +/- 102
70th
35
1957 +/- 113
63rd
6
2062 +/- 105
61st
18
2089 +/- 88
61st
8
2100 +/- 144
60th
23
2141 +/- 87
58th
21
2160 +/- 154
58th
14
2163 +/- 100
52nd
5
2222 +/- 4
52nd
4
2242 +/- 3
51st
7
2246 +/- 106
51st
5
2254 +/- 16
Median
50th
2257
49th
14
2301 +/- 43
48th
14
2312 +/- 137
46th
19
2344 +/- 163
45th
4
2413 +/- 62
42nd
5
2533 +/- 18
40th
4
2589 +/- 123
39th
4
2656 +/- 16
39th
12
2664 +/- 112
38th
4
2695 +/- 229
37th
5
2724 +/- 16
36th
4
2796 +/- 84
34th
8
2939 +/- 103
33rd
3
3019 +/- 16
30th
25
3142 +/- 192
28th
4
3274 +/- 170
28th
17
3316 +/- 193
28th
20
3337 +/- 305
Low-Tier
25th
> 3526
24th
4
3599 +/- 211
23rd
5
3655 +/- 3
23rd
4
3670 +/- 31
23rd
5
3684 +/- 12
22nd
4
3747 +/- 140
19th
10
4005 +/- 184
18th
3
4073 +/- 189
18th
5
4171 +/- 215
15th
4
4440 +/- 193
15th
5
4720 +/- 23
14th
3
4755 +/- 9
13th
3
4941 +/- 34
12th
5
5134 +/- 187
12th
3
5151 +/- 115
11th
4
5221 +/- 101
11th
3
5232 +/- 292
11th
6
5251 +/- 310
11th
8
5273 +/- 141
10th
8
5483 +/- 182
9th
7
5568 +/- 184
8th
18
5725 +/- 840
7th
3
5900 +/- 185
7th
8
5951 +/- 283
6th
6
6346 +/- 563
5th
5
6686 +/- 21
4th
5
7074 +/- 41
3rd
3
7959 +/- 28
2nd
5
8876 +/- 72
2nd
4
11684 +/- 105
2nd
3
15862 +/- 13
1st
5
19626 +/- 60
OpenBenchmarking.orgDistribution Of Public Results - Input: C240 Buckyball1078 Results Range From 996 To 20814 Seconds99613931790218725842981337837754172456949665363576061576554695173487745814285398936933397301012710524109211131811715121121250912906133031370014097144941489115288156851608216479168761727317670180671846418861192581965520052204492084660120180240300

Based on OpenBenchmarking.org data, the selected test / test configuration (NWChem 7.0.2 - Input: C240 Buckyball) has an average run-time of 48 minutes. By default this test profile is set to run at least 1 times but may increase if the standard deviation exceeds pre-defined defaults or other calculations deem additional runs necessary for greater statistical accuracy of the result.

OpenBenchmarking.orgMinutesTime Required To Complete BenchmarkInput: C240 BuckyballRun-Time306090120150Min: 17 / Avg: 46.99 / Max: 165

Does It Scale Well With Increasing Cores?

No, based on the automated analysis of the collected public benchmark data, this test / test settings does not generally scale well with increasing CPU core counts. Data based on publicly available results for this test / test settings, separated by vendor, result divided by the reference CPU clock speed, grouped by matching physical CPU core count, and normalized against the smallest core count tested from each vendor for each CPU having a sufficient number of test samples and statistically significant data.

AMDIntelOpenBenchmarking.orgRelative Core Scaling To BaseNWChem CPU Core ScalingInput: C240 Buckyball121624324864961282.074.146.218.2810.35

Tested CPU Architectures

This benchmark has been successfully tested on the below mentioned architectures. The CPU architectures listed is where successful OpenBenchmarking.org result uploads occurred, namely for helping to determine if a given test is compatible with various alternative CPU architectures.

CPU Architecture
Kernel Identifier
Verified On
Intel / AMD x86 64-bit
x86_64
(Many Processors)
ARMv8 64-bit
aarch64
ARMv8 Neoverse-N1, ARMv8 Neoverse-N1 128-Core, ARMv8 Neoverse-V1, ARMv8 Neoverse-V2, ARMv8 Neoverse-V2 72-Core, Ampere ARMv8 Neoverse-N1 128-Core, Ampere ARMv8 Neoverse-N1 256-Core, Ampere Altra ARMv8 Neoverse-N1 160-Core, Ampere Altra ARMv8 Neoverse-N1 80-Core, Ampere eMAG ARMv8 32-Core, AmpereOne 128-Core, AmpereOne 160-Core, AmpereOne 192-Core, AmpereOne 32-Core, AmpereOne 64-Core, AmpereOne 72-Core, AmpereOne 96-Core

Recent Test Results

OpenBenchmarking.org Results Compare

1 System - 336 Benchmark Results

AmpereOne - Supermicro ARS-211M-NR R13SPD v1.02 - Ampere Computing LLC Device e208

Ubuntu 24.04 - 6.8.0-39-generic-64k - GCC 13.2.0

4 Systems - 1 Benchmark Result

AMD Ryzen 9 9950X 16-Core - ASUS ROG STRIX X670E-E GAMING WIFI - AMD Device 14d8

Ubuntu 24.04 - 6.10.0-phx - GNOME Shell 46.0

1 System - 102 Benchmark Results

AMD Ryzen 9 9950X 16-Core - ASUS ROG STRIX X670E-E GAMING WIFI - AMD Device 14d8

Ubuntu 24.04 - 6.10.0-phx - GNOME Shell 46.0

1 System - 57 Benchmark Results

AMD Ryzen 9 7950X3D 16-Core - ASUS TUF GAMING X670E-PLUS WIFI - AMD Device 14d8

Ubuntu 22.04 - 6.5.0-44-generic - GNOME Shell 42.9

1 System - 60 Benchmark Results

AMD Ryzen Threadripper PRO 5975WX 32-Cores - Supermicro M12SWA-TF v1.01 - AMD Starship

Ubuntu 22.04 - 6.5.0-41-generic - GNOME Shell 42.9

1 System - 57 Benchmark Results

AMD Ryzen 9 3900XT 12-Core - ASUS PRIME X570-P - AMD Starship

Ubuntu 22.04 - 6.5.0-41-generic - Xfce 4.16

22 Systems - 263 Benchmark Results

2 x Intel Xeon 6766E - Quanta Cloud QuantaGrid D55Q-2U S7Q-MB-MPS-MDP - Intel Ice Lake IEH

Ubuntu 24.04 - 6.9.0-060900rc3-generic - GCC 13.2.0

6 Systems - 87 Benchmark Results

ARMv8 Neoverse-V1 - Amazon EC2 m7g.16xlarge - Amazon Device 0200

Ubuntu 22.04 - 5.19.0-1025-aws - GCC 11.3.0

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