hmmer-test-result

wsl testing on Ubuntu 20.04 via the Phoronix Test Suite.

Compare your own system(s) to this result file with the Phoronix Test Suite by running the command: phoronix-test-suite benchmark 2408181-NE-HMMERTEST82
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Result
Identifier
Performance Per
Dollar
Date
Run
  Test
  Duration
Intel Core i3-10110U
August 18
  45 Minutes


hmmer-test-resultOpenBenchmarking.orgPhoronix Test SuiteIntel Core i3-10110U (2 Cores / 4 Threads)4096MB0GB Virtual Disk + Virtual Disk + 275GB Virtual DiskUbuntu 20.045.15.153.1-microsoft-standard-WSL2 (x86_64)X Server + WaylandGCC 9.4.0 + Clang 10.0.0-4ubuntu1ext41920x1080wslProcessorMemoryDiskOSKernelDisplay ServerCompilerFile-SystemScreen ResolutionSystem LayerHmmer-test-result BenchmarksSystem Logs- Transparent Huge Pages: always- --build=x86_64-linux-gnu --disable-vtable-verify --disable-werror --enable-checking=release --enable-clocale=gnu --enable-default-pie --enable-gnu-unique-object --enable-languages=c,ada,c++,go,brig,d,fortran,objc,obj-c++,gm2 --enable-libstdcxx-debug --enable-libstdcxx-time=yes --enable-multiarch --enable-multilib --enable-nls --enable-objc-gc=auto --enable-offload-targets=nvptx-none=/build/gcc-9-9QDOt0/gcc-9-9.4.0/debian/tmp-nvptx/usr,hsa --enable-plugin --enable-shared --enable-threads=posix --host=x86_64-linux-gnu --program-prefix=x86_64-linux-gnu- --target=x86_64-linux-gnu --with-abi=m64 --with-arch-32=i686 --with-default-libstdcxx-abi=new --with-gcc-major-version-only --with-multilib-list=m32,m64,mx32 --with-target-system-zlib=auto --with-tune=generic --without-cuda-driver -v - CPU Microcode: 0xffffffff- gather_data_sampling: Unknown: Dependent on hypervisor status + itlb_multihit: KVM: Mitigation of VMX disabled + l1tf: Not affected + mds: Not affected + meltdown: Not affected + mmio_stale_data: Vulnerable: Clear buffers attempted no microcode; SMT Host state unknown + retbleed: Mitigation of Enhanced IBRS + spec_rstack_overflow: Not affected + spec_store_bypass: Mitigation of SSB disabled via prctl and seccomp + spectre_v1: Mitigation of usercopy/swapgs barriers and __user pointer sanitization + spectre_v2: Mitigation of Enhanced IBRS IBPB: conditional RSB filling PBRSB-eIBRS: SW sequence + srbds: Unknown: Dependent on hypervisor status + tsx_async_abort: Not affected

Timed HMMer Search

This test searches through the Pfam database of profile hidden markov models. The search finds the domain structure of Drosophila Sevenless protein. Learn more via the OpenBenchmarking.org test page.

OpenBenchmarking.orgSeconds, Fewer Is BetterTimed HMMer Search 3.3.2Pfam Database SearchIntel Core i3-10110U50100150200250SE +/- 5.11, N = 12222.871. (CC) gcc options: -O3 -pthread -lhmmer -leasel -lm -lmpi